Class: Family

Table containing family information

classDiagram class Family click Family href "../Family" Family : consanguinity Family --> "1" ConsanguinityEnum : consanguinity click ConsanguinityEnum href "../ConsanguinityEnum" Family : consanguinity_detail Family : family_history_detail Family : family_id Family : pedigree_file Family : pedigree_file_detail

Slots

Name	Cardinality and Range	Description	Inheritance
family_id	1 String	Identifier for family (primary key)	direct
consanguinity	1 ConsanguinityEnum	Indicate if consanguinity is present or suspected within a family	direct
consanguinity_detail	0..1 String	Free text description of any additional consanguinity details	direct
pedigree_file	0..1 String	name of file (renamed from pedigree_image because it can contain a PED file o...	direct
pedigree_file_detail	0..1 String	Free text description of other family structure/pedigree file caption or lege...	direct
family_history_detail	0..1 String	Details about family history that do not fit into structured fields	direct

Identifier and Mapping Information

Schema Source

from schema: https://w3id.org/madanucd/gregor_linkml

Mappings

Mapping Type	Mapped Value
self	gregor_linkml:Family
native	gregor_linkml:Family

LinkML Source

Direct

name: Family
description: Table containing family information
from_schema: https://w3id.org/madanucd/gregor_linkml
slots:
- family_id
- consanguinity
- consanguinity_detail
- pedigree_file
- pedigree_file_detail
- family_history_detail

Induced

name: Family
description: Table containing family information
from_schema: https://w3id.org/madanucd/gregor_linkml
attributes:
  family_id:
    name: family_id
    description: Identifier for family (primary key)
    from_schema: https://w3id.org/madanucd/gregor_linkml
    rank: 1000
    identifier: true
    alias: family_id
    owner: Family
    domain_of:
    - Participant
    - Family
    range: string
    required: true
  consanguinity:
    name: consanguinity
    description: Indicate if consanguinity is present or suspected within a family
    from_schema: https://w3id.org/madanucd/gregor_linkml
    rank: 1000
    alias: consanguinity
    owner: Family
    domain_of:
    - Family
    range: ConsanguinityEnum
    required: true
  consanguinity_detail:
    name: consanguinity_detail
    description: Free text description of any additional consanguinity details
    from_schema: https://w3id.org/madanucd/gregor_linkml
    rank: 1000
    alias: consanguinity_detail
    owner: Family
    domain_of:
    - Family
    range: string
  pedigree_file:
    name: pedigree_file
    description: name of file (renamed from pedigree_image because it can contain
      a PED file or image)
    from_schema: https://w3id.org/madanucd/gregor_linkml
    rank: 1000
    alias: pedigree_file
    owner: Family
    domain_of:
    - Family
    range: string
  pedigree_file_detail:
    name: pedigree_file_detail
    description: Free text description of other family structure/pedigree file caption
      or legend.
    from_schema: https://w3id.org/madanucd/gregor_linkml
    rank: 1000
    alias: pedigree_file_detail
    owner: Family
    domain_of:
    - Family
    range: string
  family_history_detail:
    name: family_history_detail
    description: Details about family history that do not fit into structured fields.
      Family relationship terms should be relative to the proband.
    from_schema: https://w3id.org/madanucd/gregor_linkml
    rank: 1000
    alias: family_history_detail
    owner: Family
    domain_of:
    - Family
    range: string